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The Corpus Callosum

The Corpus Callosum is an occasional journal of armchair musings, by a suburban, reality-based, slightly-left-of-center guy, who reserves the right to be highly irregular at times. Topics: social commentary, neuroscience, politics, science news. Mission: to develop connections between hard science and social science, using linear thinking and intuition; and to explore the relative merits of spontaneity vs. strategy.

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Corpus Callosum is written by a psychiatrist at a small community hospital somewhere in the USA. Email to cc.scienceblogger at gmail dot com.


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March 2, 2010

Dietary Practices, Depression and Anxiety

Category: PsychiatryPublic HealthSocial Issues

The January 2010 American Journal of Psychiatry has two articles pertaining to the relationship between dietary practices and mental health.  One article presents the results of a study; the other is an editorial.

Association of Western and Traditional Diets With Depression and Anxiety in Women
Jacka et al.
Am J Psychiatry 2010; 167:305-311 (published online January 4, 2010; doi: 10.1176/appi.ajp.2009.09060881) © 2010 American Psychiatric Association

February 21, 2010

Evolution Messed Up?

Category: Armchair MusingsPhotos of Interest

James Gunn, the director for the movie Slither, seems to be enthralled by creepy crawly things.  He also has a blog-like website, on which he posted Evolution Fucked Your Shit Up: The World's 50 Freakiest Animals. (HT: Interesting Pile.)

The creature pictured above, by the way, is an ajolote.  The term ajolote can refer to either the Axolotl an (aquatic salamander (genus Ambystoma), or it can refer to the Mexican mole lizard (Bipes biporus).  The one in the picture is the lizard, Bipes biporus.

I am not going to say any more about the vexations of taxonomy, or even about Mr. Gunn.  The photos are kind of neat, but they speak for themselves.  What I am going to address is the notion that evolution messed these creatures up.  I suspect that Mr. Gunn was not intending to make a scientifically verifiable statement.  But it is way off base, and it illustrates a fundamental misconception about evolution. 

February 14, 2010

Zen and the Art of Dracaena Growing

Category: Armchair Musings

Sometimes I see sad-looking plants on clearance, buy them, and try to heal them.  This activity provides me with a gratification that is similar to that which comes from healing sad-looking people, but without the tribulations that occur if it does not work as well as we had hoped.

I even have some of these plants in my office (although none of the worse cases go there).  At stressful times, I may go and look at the parts of the plants that are growing well: apical meristems, leaf primodia, and axillary buds -- or green shoots, in the vernacular of our time.   I just look at them.  I don't actually do anything, at least anything that is outwardly visible, most of the time. 


February 10, 2010

Proposed Diagnostic Criteria Revisions

Category: Psychiatry

The American Psychiatric Association has gone public with the details of their proposed revisions to their Diagnostic and Statistical Manual.  As expected, most of this is bland and not worthy of attention from the general public. 

Unfortunately, as Benedict Carey points out, the book often is used for purposes other than those for which it is intended, which can lead to unintended consequences.  It remains to be seen what these will be.

I'm just going to make some quick, admittedly superficial comments. 

First, I wince at the new category for autism: Autism Spectrum Disorder:

February 1, 2010

Objective Diagnosis Of PTSD Using Magnetoencephalography

Category: NeurosciencePsychiatry

ResearchBlogging.orgObjective diagnosis is in some ways the holy grail of medicine.  It has been maddeningly elusive in psychiatry.  Now comes a paper in which the authors suggest that they may have found this treasure.

The paper details a method of using magnetoencephalography to assess human brain function.  They claim that, in a select population, it can correctly identify patients with PTSD with 90% accuracy. 

The synchronous neural interactions test as a functional neuromarker for post-traumatic  stress disorder (PTSD): a robust classification method based on the bootstrap
A P Georgopoulos et al 2010 J. Neural Eng. 7 016011

Abstract. Traumatic experiences can produce post-traumatic stress disorder (PTSD) which is a debilitating condition and for which no biomarker currently exists (Institute of Medicine (US) 2006 Posttraumatic Stress Disorder: Diagnosis and Assessment (Washington, DC: National Academies)). Here we show that the synchronous neural interactions (SNI) test which assesses the functional interactions among neural populations derived from magnetoencephalographic (MEG) recordings (Georgopoulos A P et al 2007 J. Neural Eng. 4 349-55) can successfully differentiate PTSD patients from healthy control subjects. Externally cross-validated, bootstrap-based analyses yielded >90% overall accuracy of classification. In addition, all but one of 18 patients who were not receiving medications for their disease were correctly classified. Altogether, these findings document robust differences in brain function between the PTSD and control groups that can be used for differential diagnosis and which possess the potential for assessing and monitoring disease progression and effects of therapy.

The synchronous neural interactions test is a test that is done by having persons perform a simple task, while the magnetic signals from their brain are being measured.  The process is called magnetoencephalography.  The resulting record is called a magnetoencephalogram (MEG).  It is similar to an electroencephalogram (EEG).  The difference is that the EEG measures small electric currents.  The MEG measures magnetic impulses.  These impulses are only slightly affected by the intervening tissue (skull, skin, etc).  Therefore, it is possible to get readings that are more precise.  The downside is that it requires a more elaborate device, and a special, magnetically-shielded, room.  Very few of these devices exist.

January 30, 2010

Google Chrome on Opensuse 11.2

Category: Computing

I decided to try using Google Chrome as a web browser. The reason is that it is supposed to be faster, particularly for sites that make heavy use of Flash. It turns out that installing it is a hassle if you do it the obvious way, because Flash does not work without fiddling around. That sort of defeats the purpose.

The easier way is to use the one-click install at:
http://software.opensuse.org/ymp/ope...2/chromium.ymp.

This adds the necessary repositories, downloads the application, and configures it so that flash works right away.

It seems to work pretty well. It remains to be seen, however, if Chrome has any chance of becoming my main browser. After all, the first browser I used was NCSA Mosaic, which morphed into Netscape Navigator, which went through several iterations, then became the basis for Firefox. I just followed along. After 17 years, it might be hard to change.

January 25, 2010

Glaxo Patent Giveaway: Charity or "Theft"?

Category: MedicineSocial Issues

I saw this headline on Google Fast Flip, and had to read it.  I'm always game for an anti-big-pharma story: even though I appreciate their efforts to relieve suffering, I do like to take notice of their shadier practices.

Is Glaxo's Charity Really Theft?
Jan 20 2010, 5:30 pm
by Daniel Indiviglio

Is there a fine line? Corporations have a duty to shareholders to maximize profits. But when they donate to charity -- which is regularly done these days, often through foundations -- this takes money out of shareholders' hands or stifles future growth. It instead provides that money to some cause that management deems appropriate. But Glaxo-SmithKline's recent decision to put thousands of chemical compounds which may cure malaria into the public domain gives this question a new dimension, adding additional complexity...

The story does not go where I expected.  It is not talking about some kind of charity scam, in which they get PR karma for doing something that really only benefits themselves.  Rather, the story is about the fact that Glaxo is releasing some of the compounds it has developed, into the public domain.

Indiviglio's story is posted on the Atlantic business blog.  It is based upon an article in the (UK) Guardian.  The Guardian version is reasonably thoughtful, whereas the Atlantic version is frankly offensive.

January 19, 2010

Why should the city be a concrete desert?

Category: Armchair MusingsEnvironmenteconomy

Susanne Sternthal, a writer based in Moscow, has published an article about the ecology of stray dogs.  The article is in Financial Times, of all places.  Why is that?

Moscow's stray dogs
By Susanne Sternthal
January 16 2010 00:04

January 18, 2010

Comments on the Morphine-for-PTSD Article

Category: NeurosciencePsychiatryScience in the Media

I've been mulling this over for a few days, finally deciding to write about it.  There was an article in the NYT on 13 January 2010 about an NEJM article:

Morphine May Help Traumatic Stress
By BENEDICT CAREY
Published: January 13, 2010

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